Introduction to De Novo Assembly
Module 6 - Key concepts
- Introduction to denovo transcript assembly
- Introduction to Trinity
Module 6 - Learning objectives
- Understand the challenges involved in reconstructing transcripts from RNA-Seq data
- Become familiar with computational algorithms and data structures leveraged for transcript assembly
- Appreciate the importance of strand-specific RNA-Seq data for transcript reconstruction
- Differentiate between differential gene expression and differential transcript usage.
Lecture
