Introduction to Expression Analysis

« Team Assignment - Alignment Course Expression Analysis with Stringtie and htseq-count »

Module 3 - Key concepts

• Expression estimation, FPKM, TPM, StringTie overview, BallGown overview, multiple testing correction, etc.

Module 3 - Learning objectives

• Expression estimation for known genes and transcripts
• FPKM/TPM expression estimates vs. raw counts
• Differential expression methods
• Downstream interpretation of expression and differential estimates

Lectures

• Abundance Estimations lecture
• HTSEQ lecture
• Differential expression lecture

« Team Assignment - Alignment Course Expression Analysis with Stringtie and htseq-count »