RNA-seq Bioinformatics

Introduction to bioinformatics for RNA sequence analysis

Syntax

In this tutorial, created using Jekyll (alembic theme) and Kramdown Flavored Markdown, code blocks display commands necessary to complete the tutorial. Some sections are marked as optional and can be skipped.

A code block will look like this:

sudo apt-get install tree
cd ~
# comment
tree -I workspace/tools 

All lines contained within the highlighted boxes will need to be executed at the command line (or occasionally at an R command prompt). When copy/paste is used be sure to hit Return or Enter after pasting each command or set of commands. All lines starting with a ‘#’ are comments and will not be interpretted by the shell/R session.